Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902845.1_cds_XP_016452843.1_47032
CDS Infomation

[gene=LOC107777350] [db_xref=GeneID:107777350] [protein=protein HOTHEAD-like] [protein_id=XP_016452843.1] [location=join(2003..2075,2704..3345,3978..4366,4898..5463,6075..6129)] [gbkey=CDS]
Sequence

ATGGAGTTTGGTTTGATCAATGCTGCTCTTCTTGCATTTTTCTTCTTTCTTCGCTTCTGT
TTTTCTGAAAAAGCTCCAAACTACTCATTCATGCACCAAGCAACTACAGCTCCGGACACT
TCATACTACGACTACATAATCATCGGCGGCGGCACCGCCGGCTGCCCATTAGCCGCCACA
CTTTCTCAGAACTACAGCGTTCTTTTACTCGAACGCGGCGGTTCACCTTATGGAAATCCA
AATATCACGAATTTATCGGAATTCGGATCAGCACTTTCTGATCTCTCGCCAACTTCGCCT
TCTCAGCGTTTCATTTCCGAGGACGGTGTAATTAACGCGCGTGCACGCGTTCTGGGCGGA
GCAAGCTGCTTAAATGCCGGGTTTTATTCACGCGCCGGCACAAAGTACGTGAACCGCGTG
GGGTGGGATGGTAAGCTGGTGAATGAATCGTATATTTGGGTGGAAAACAAAGTGGCGTTT
CAGCCGCCGGTTAAGCAGTGGCAATCCGCCGTGCGCGACGGTCTTGTGGAATCTGGGGTG
GTGCCATACAATGGTTTTACATATGATCATATAAATGGGACTAAGGTTGGTGGTACTATC
TTCGACGCCAACGGCAGCCGCCACACGGCTGCCGATCTTCTTGAGTATGCTAACCCTAGT
GGCATCATTGTCCTTTTGCATGCTTCTGTCCAAAAAATCTTGTTCAATACCAAAGGAGTG
GCAAGGCGAGTAGCTCGTGGTGTAGTATTTAGAGATGCATTAGGGAAGAAACACAAGGCA
TACTTGAAAAGAGGAGAAATGAATGAAGTAATTGTTTCATCTGGGGCACTTGGGAGCCCA
CAAATGTTAATGTTAAGTGGGGTAGGCCCATCAGCCCAATTAAAGGCCCATAACATCACG
GTTGTATTGGATCAGCCCAATGTTGGTCAAGGCATGTCGGACAACCCAATGAATGCCATT
TTTGTGCCATCACCTGTCCCTGTTGAAGTTTCTCTCATTCAAGTTGTTGGCATTACTCAC
TTTGGTAGCTATATTGAAGCTGCCTCCGGCGAGAACTTCGCCGGCCGTGAAACTCTAAGC
GATTACGGAATGTTCTCTCCAAAGATTGGGCAGCTATCAACAGTGCCACCAAAACAAAGA
ACACCAGAAGCCTTGGAAAAAGCCATAAATGCCATGAGTGAACTAGATGATTCAGCTTTT
AGAGGAGGATTCATAATAGAAAAGATAATGGGCCCAATATCCACAGGACACTTGGAGCTC
CGAACCCGGAACCCGAATGACAATCCATCAGTCACCTTCAACTACTTCAAACAGCCAGAG
GACTTACAAAGATGTGTAAATGGGCTCAAAGTGATAGAAAACATAATTGAATCAAAATCA
TTCTCAAAATTCAGATATGATACAATTTCAATACCAGCATTACTCAATTTGACAGCAAGT
GCTCCAGTGAATTTATTGCCAAGACATGACAATGTTTCAGTGTCCTTAGAACAATTTTGT
AAGGACACAGTTATGACAATTTGGCATTATCATGGAGGGTGTCAAGTTGGTAGGGTGGTT
GATCAAGATTATAAGGTTATTGGGATTGGAAAATTAAGGGTAATTGATGGTTCAACTTTT
AGTTACTCTCCTGGAACTAATCCTCAAGCCACTGTCATGATGCTAGGAAGGTATATGGGA
GTAAGAATACTGAATGAGAGACTTGCAAAAGAGAAGAGTCATTAA

Peptide Sequence

PEP ID

XP_016452843.1
PEP Infomation

PREDICTED: protein HOTHEAD-like [Nicotiana tabacum]
Sequence

MEFGLINAALLAFFFFLRFCFSEKAPNYSFMHQATTAPDTSYYDYIIIGGGTAGCPLAAT
LSQNYSVLLLERGGSPYGNPNITNLSEFGSALSDLSPTSPSQRFISEDGVINARARVLGG
ASCLNAGFYSRAGTKYVNRVGWDGKLVNESYIWVENKVAFQPPVKQWQSAVRDGLVESGV
VPYNGFTYDHINGTKVGGTIFDANGSRHTAADLLEYANPSGIIVLLHASVQKILFNTKGV
ARRVARGVVFRDALGKKHKAYLKRGEMNEVIVSSGALGSPQMLMLSGVGPSAQLKAHNIT
VVLDQPNVGQGMSDNPMNAIFVPSPVPVEVSLIQVVGITHFGSYIEAASGENFAGRETLS
DYGMFSPKIGQLSTVPPKQRTPEALEKAINAMSELDDSAFRGGFIIEKIMGPISTGHLEL
RTRNPNDNPSVTFNYFKQPEDLQRCVNGLKVIENIIESKSFSKFRYDTISIPALLNLTAS
APVNLLPRHDNVSVSLEQFCKDTVMTIWHYHGGCQVGRVVDQDYKVIGIGKLRVIDGSTF
SYSPGTNPQATVMMLGRYMGVRILNERLAKEKSH

Transcript Sequence

Gene sequence data has not been registered.